Oncology

ONCOLOGY and EPIGENETICS

P. Zafiropoulos S.A. in collaboration Dia-Chem S.R.L. offers high specificity, sensitivity full panel systems, easy to perform for the study of oncology and epigenetics.

DNA methylation is a post-replicative process. The extention of the modifications regarding the DNA methylation is basically determined during development. DNA methylation is therefore one of the mechanisms related with cell differentiation through inhibition of gene expression at the transcriptional level and is essential for the normal development of mammals, it is associated with genomic imprinting, transcriptional inactivation of the X chromosome and aging, has a role in the development of pathological events, such as carcinogenesis. DNA methylation is an epigenetic post-synthetic modification that, with the transfer of a methyl group from Sadenosylmetionina C atom in position 5 of the cytosine ring, introduces 5mC as the new base in the DNA. The CpG islands contain CpG dinucleotides at a frequency mathematically predetermined. Most of the CpG islands are about 30,000 generally located 5 ‘end of the promoter region of housekeeping genes, sometimes overlapping the region coding for a variable extension (usually the first exon). The frequency of the presence the CpG dinucleotides in the genome is less than expected, except for the regions of CpG islands. This is the result of an evolutionary mechanism linked to the presence of a spontaneous deaminase activity in the nucleus. This enzymatic reaction transforms the methylated cytosine in thymine and the non-methylated C in Uracil. Checks and repair mechanisms recognize the Uracil base as extraneous DNA and therefore replace, while this substitution does not occur for Thymine, common base in the DNA. The most CpG are no methylated in a normal cell, regardless of the state of the transcriptional gene, while during cancer development the CpGs outside of CpG islands become hypomethylated, and CpG islands in the promoter region of tumor suppressor genes become hypermethylated. This hypermethylation is associated with chromatin condensation and loss of transcription. The most recent data indicate that genetic and epigenetic events interact to help the progressive development of cancers.

 

Code Description
1.410                 Ampli set GSTP1 promoter
Detection of methylation status of Glutatione-S-Transferase (GSTP1) promoter gene. With DNA modification
1.411 Ampli set Lung cancer
Detection of methylation status of p16 (CDKN2), DAP-kinase and 06- metilguanine DNA methyltransferase (MGMT) promoter genes. With DNA
modification
1.412 Ampli set Breast cancer
Detection of methylation status of p16 (CDKN2), BRCA1 and GSTP1
promoter genes. With DNA modification
1.413 Ampli set Colon cancer
Detection of methylation status of P16 (CDKN2) oncosuppressor gene, DAPkinase
and 06-metilguanine DNA methyltransferase (MGMT) promoter
genes.With DNA modification
 1.414 Ampli set BRCA 1-2
Identification of 185delAG, 188del11bp, 5382insC BRCA1 and 6174delT
BRCA2 genes mutations
 1.414-7 Ampli set BRCA 1-2
Identification of 185delAG, 188del11bp, 5382insC, 1499insA, 5083del19 in
BRCA1 and 6174delT, 5445del4 in BRCA2 genes mutations
1.415 Ampli set BRCA1
Identification of 1499insA, 3596del4, 4172insT, 5083del19, 677insA BRCA1
gene mutations
1.416 Ampli set BRCA2
Identification of 5445del4, 6696delTC, 9189del4 BRCA2 gene mutations
1.417  Ampli set p16 (CDKN2) promoter
Detection of promoter methylation status in P16 (CDKN2) gene. With DNA
modification
1.419 Ampli set MGMT promoter
Detection of promoter methylation status in MGMT gene. With DNA
modification
1.420 Ampli set hMLH 1 promoter
Detection of promoter methylation status in hMLH1 gene. With DNA
modification
1.421 Ampli set BRCA 1 promoter
Detection of promoter methylation status in BRCA 1 gene. With DNA
modification
1.422 Ampli set DAP-kinase promoter
Detection of promoter methylation status in DAP kinase gene. With DNA
modification
1.429

Ampli set PARP-1 Val762Ala
Identification of Val762Ala polymorphism in PARP-1

(Poly-ADP-ribosepolymerase-1) enzyme

  ONCOLOGY EPIGENETICS REAL TIME PCR
1.410RT Ampli set GSTP1 promoter
Detection of methylation status of Glutatione-S-Transferase (GSTP1)
promoter gene in real time PCR.With DNA modification
 1.417RT Ampli set p16 (CDKN2) promoter
Detection of methylation status of p16 promoter gene in real time PCR.
With DNA modification
1.419RT Ampli set MGMT promoter
Detection of methylation status of MGMT promoter gene in real time PCR.
With DNA modification
1.420RT Ampli set hMLH 1 promoter
Detection of methylation status of hMLH1 promoter gene in real time PCR.
With DNA modification
1.421RT Ampli set BRCA 1 promoter
Detection of methylation status of BRCA 1 promoter gene in real time PCR.
With DNA modification
1.422RT Ampli set DAP-kinase promoter
Detection of methylation status of DAP kinase promoter gene in real time
PCR. With DNA modification